Changes in version 0.3.3                        

  - Added functionality for 10x Flex, Parse, 10x multiome
  - Added 'technology' flag when creating R6 object
  - Added plotBarcodeRankPlot
  - Added plotRawDepth
  - Added 'depth.cutoff.upper' flag for plotEmbedding,
    plotFilteredCells, filterCms

                 Changes in version 0.3.2 (2024-11-07)                  

  - Fixed error in plotFilteredCells
  - Added author e-mail (missing)

                        Changes in version 0.3.1                        

  - Minor bug fix for issue #52

                 Changes in version 0.3.0 (2023-09-01)                  

  - Several minor bug fixes
  - Updated createEmbedding upon resolve of
    https://github.com/kharchenkolab/conos/issues/123
  - Updated DESCRIPTION
  - Added checks for detectDoublets
  - Added possibility for multiple paths for "data.path" argument in
    initialize
  - Changed depth calculation from Conos depth to raw depth, i.e.,
    column sums
  - Added plotting palette to object through argument pal
  - Fixed bug for filterCms where species was not forwarded to
    getMitoFraction internally
  - Moved adding list of CMs to CRMetrics object from
    addDetailedMetrics() to addCms() since this is more logical
  - detectDoublets can now export Python script with argument export =
    TRUE
  - Added addDoublets function to add doublet results generated with
    exported Python scripts
  - Updated vignette

                 Changes in version 0.2.3 (2022-12-14)                  

  - Updated tests and examples to pass CRAN checks

                 Changes in version 0.2.2 (2022-11-30)                  

  - Prepared for submission to CRAN

                        Changes in version 0.2.1                        

  - Added a NEWS.md file to track changes to the package.